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FICUS-NERSC/KBASE
… in the next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating facilities. Reviewers consider technical feasibility and readiness to begin work, checking … The ranked proposal list, along with a recommendation from management at JGI and the other participating …
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JGIota: The Algae Nicknamed ‘Chlamy’
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IMG Group
… species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control …
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Refining the Process of Identifying Algae Biotechnology Candidates
The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a … for controlling the lipid content of biofuels sourced from algae. The collaborative approach highlights how the …   … This research was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s …
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Tanja Woyke
… a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her … including the Community Science Program and Emerging Technical Opportunity Program. The Deputy of User Programs … Advisory Committee member for the Center for Biotechnology and Bioinformatics at Virginia State University …
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A Complex Confection Decoded: Sugarcane Reference Genome
… now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most … to future environmental conditions. Additionally, insights from the genome could help scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. Finally, understanding how …
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Ian Blaby
… and eukaryotes. Frontiers in Bioengineering and Biotechnology. 11. 2023 Liu et. al., Bacterial genome editing … algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., … profiling of a synchronized diurnal transcriptome from Chlamydomonas reinhardtii reveals continuous cell and …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on … visualization tools, to using natural language processing techniques to categorize genetic information. Learn more … due to COVID-19 restrictions, but virtual events and technology enabled a fruitful experience for mentors and …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI … two interns returned to re-engage with their mentors from the previous year and continue working on their …
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Nikos Kyrpides
… of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, Greece … Pavlopoulos GA et … of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the … et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … Summary The two most common methods for collecting genomes from microorganisms are shotgun (group) metagenomic … than its single-cell counterpart. In this approach, DNA from all the different species is mixed together and …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With … P transect, a series of geographic coordinates which go from coastal to open ocean waters. Between 2010 and 2016, …
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