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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals … about the general review process or get details on the internal synthetic biology review process .  …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … study suggests, is displacing these important cold-water communities of algae with warm-adapted ones, a trend that … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* Targets Actual …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … one of the senior authors on the paper, of the uncovered viral diversity. “Although the technical challenges of data … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to … our efforts to characterize poorly-studied algal and viral genomes, and integrate with key DOE Office of … By sequencing the millet rhizosphere and endosphere communities both with and without the shrub’s presence, …
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Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains
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VEGA Symposium
… Lab Attendee – $250 Student – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – … – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will … 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” community to foster discussion on how to …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … focusing on how environmental stress and microbial communities affect plant growth and productivity. These …
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Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity
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Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
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Long-term warming modulates diversity, vertical structuring of microbial communities, and sulfate reduction in coastal Baltic Sea sediments
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