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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …
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Fungal Friends or Foes in Plant Roots
… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… gene duplications, and even more ancient gene transfers from bacteria have all armed the plant with an array of … power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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John Vogel
… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes … 2019 Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic …
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Partnerships: Myco-Ed
… selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a … and researchers, facilitating the transition from genomic sequences to biological inference and understanding of …
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Insights into bilaterian evolution from three spiralian genomes
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to … that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us …
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Sequencing of Genomes from Environmental Single Cells
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Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Gene Expression: From On-Off Switch to Dial
… area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the … under FP00005685. In addition, M.D. acknowledges funding from a National Defense Science and Engineering Graduate …
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Marine Microbe Contains Multitudes
But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA …
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