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… fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … learn the value of their item. Part of that pleasure comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the …

… the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …

… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic context. …

… selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … sequencing and tissue preparation), allowing participation from a growing audience. For consistency and to reduce … Institute where high molecular weight DNA is extracted from samples, which is then sent to the JGI for genome …

… But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA …

… A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …

… The chromosome-scale genome sequence of trifoliate orange yields clues to … that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …

… impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute …