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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … on JGI Advisory Committees are outlined in this Code of Conduct. … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Natural Prodcast Episode 9: Roger Linington
… Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon of the …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … Jill Banfield approached Doudna with repeated genetic sequences (already known as CRISPR) that came up in her … Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, developing …
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … about 200,000 fungal species have been named. Among those sequenced, roughly half of all genes have completely unknown … comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews Microbiology of nearly …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in … bioenergy feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the …
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User Support
… The JGI Project Management Office carries out a number of activities to facilitate … has completed, your Project Manager will initiate analysis with the appropriate JGI analysis team. During this time, your Project Manager will: …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … colonization, which can affect pathogenic and symbiotic bacterial interactions with animals and plants, or cause … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a …
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