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… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural … included how to use deep learning to predict protein function (Héctor García Martin of Berkeley Lab’s Biological … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* Targets Actual …

A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their …

Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need … the next deadline is July 31. You can learn more about our Community Science Program here .  …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … way to connect genes and infer changes in gene function across the phylogeny — and link these into our DOE …

… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for …

… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … on a pilot project with biology students from Boca Raton Community High School in Palm Beach County, Florida. The … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, …

… and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …

The central mission of the JGI’s Genomic Technologies department is   ensuring … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …