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Morphogenesis, starvation, and light responses in a mushroom-forming fungus revealed by long-read sequencing and extensive expression profiling
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From Competition to Cooperation
… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … relationships, and how the mutualistic associations allow host plants, such as candidate  bioenergy feedstock … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … UEC members and will serve a one-year term in that role. Following this term, the Incoming Chair will transition to …
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Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
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Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES
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The Orange Carotenoid Protein: a blue-green light photoactive protein
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Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light
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A photoactive carotenoid protein acting as light intensity sensor
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Machine learning sheds light on microbial dark proteins
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Shedding light on spatial structure and dynamics in phototrophic biofilms
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … has also utilized a very large collection of type-strain isolates, provided by the Leibniz Institute DSMZ – … from which a researcher can easily procure a culture for follow up work, but also maintains various bioinformatic tools …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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