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Environmental Genomics Group
… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of … Profile HMM search across all IMG metagenomes, capturing sequence diversity for proteins of interest. … better understanding of complex ecosystems within hard to sequence and assemble samples, such as those from soil and …
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JGI@25: Studying Sorghum’s Survival Skills
… but other important crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for … Science Program, Todd Mockler and his team collect diverse lines of sorghum to understand what genes exist across the … the soybean relative Glycine max ( 2014 ) and the grass Brachypodium distachyon ( 2017 ), have identified many more …
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BdERECTA controls vasculature patterning and phloem-xylem organization in Brachypodium distachyon
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The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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Salt tolerance of two perennial grass Brachypodium sylvaticum accessions
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis
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Patterns of pan‐genome occupancy and gene coexpression under water‐deficit in Brachypodium distachyon
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Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
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Recreating Stable Brachypodium hybridum Allotetraploids by Uniting the Divergent Genomes of B. distachyon and B. stacei
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