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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group … And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program … They also implemented the use of Klaatu, a freezer management system that monitors energy use and helps detect …
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River microbiomes from around the world: Kelly Wrighton
… have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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Fishing for Novel Cellulose Degraders
… When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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Partnerships: Myco-Ed
… Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations All MycoEd … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Examples: Successful LOIs & Submissions
… calls. These documents have been shared with permission from the PIs who drafted them.  …
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Clades of huge phages from across Earth’s ecosystems
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CSP Functional Genomics
… please reach out to Christa Pennacchio, Project Management Office. For questions about the appropriateness of …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more … first paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the … JGI in 2009 and it is considered to be a Flagship Plant. By uncovering and characterizing the mechanisms through which …
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Nikos Kyrpides
… of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in … on Microbiome Data Science. His group is developing novel methods for enabling large-scale comparative analysis, … Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed …
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A genomic view of Earth’s biomes
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can … This work was partially supported by awards from US Department of Energy (DOE) Office of Science, Office …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and … No: GINOP-2.3.2-15-2016-00052). GJSz received funding from the European Research Council under the European …
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