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Natural Prodcast Episode 2: The Primer, Part 2
… products because they’re easy to find. They grow in the soil. These are the same guys that produce geosmin. And so we … natural environment. They usually grow down within the soil. And that purple blob is going to be chock full of … Yeah, vancomycin amphotericin, cephalosporin, tylosin, suka Meissen poly oxen. Some of these I definitely never …
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Diel partitioning in microbial phosphorus acquisition in the Sargasso Sea
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How to Target a Microbial Needle within a Community Haystack
… complex environmental samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine … strides in generating genome sequences for members of the microbial world through bulk community sequencing … group of marine bacteria called “Vis6” that are found in North Sea algal blooms. The workflow starts by tagging …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… as just that on a catastrophic scale from Baja California north into Oregon and beyond. The disease is known more commonly as Sudden Oak Death or by its … to fingerprint the pathogen and trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with …
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg … Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells team …
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Partnerships Development Team
… of Energy missions. Click to learn more.   … SPPs enable research funded by an Industry partner to perform a defined … for farmers concerned with improving sustainable soil management practices. … In June 2020, the Department of … Partnerships … The Team Nigel Mouncey, JGI Director Trent Northen , JGI Metabolomics Science Program Head Yasuo …
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DNA Synthesis Program
… energy and environmental challenges. Through innovative research in synthetic biology, the program enables the design … challenges. The program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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Plant-Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … better understand the plant-associated terrestrial world. Research Team    … Plant microbiomes hold the amazing ability …
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Natural Prodcast Episode 4: Nancy Keller
… with Nancy Keller, a fantastic fungal natural products researcher from the University of Wisconsin. Like we discussed … for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and enthusiasm … That has a lot to do with, well, the fact that it’s a eukaryotic genome, I guess, and the way DNA is activated. The …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science …
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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A Plant Root Atlas for Tracking Developmental Trajectories
… at the University of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt Universität zu … Cell and provides a community resource that could help researchers track cell development and how they determine … One of the study’s co-authors is  Benjamin Cole , a research scientist at the U.S. Department of Energy (DOE) …
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