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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … virus diversity and host interactions through global metagenomics. Nature 578(7795):432-436 Sberro H, et al. (2019) …
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Analysis of the complete mitochondrial genome sequences of the soybean rust pathogens Phakopsora pachyrhizi and P. meibomiae
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Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi
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Game On: High School Students Drive Everglades Metagenomics Study
… workshop at the  2019 Association for Environmental Studies and Sciences (AESS) Conference in Orlando, Florida.  … concentration, and organic carbon concentration. From Field Studies to Publication Together as a class, the students … a deeper understanding of both the research process and metagenomics while legitimately contributing to the body of …
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Frequently Asked Questions: Proposal Submission
… If I have ongoing research funding to carry out functional studies using the proposed sequencing data, should I mention …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the …
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pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar
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The Metagenome of an Anaerobic Microbial Community Decomposing Poplar Wood Chips
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Influences of Climate on Phyllosphere Endophytic Bacterial Communities of Wild Poplar
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JGI@25: Using Team Science to Build Communities Around Data
… countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community … of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie … relationships with plants and bacteria; in many instances, fungal physiology is impacted by these bacteria during …
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Natural Prodcast Episode 9: Roger Linington
… environmental roles of these compounds? Can we perform studies such as looking at the distributions of different …
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