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A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), …

… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … soil samples from four sites: Aspurz, Spain; Champenoux, France; Lamborn, Sweden; Montmorency, Canada. These sites …

In honor of the JGI's 25th anniversary in 2022, we have … but other important crops as well. In 2009, the JGI sequenced and analyzed the first reference genome for … the species. Earlier pan-genomes for other plants, like the soybean relative Glycine max ( 2014 ) and the grass …

Analysis reveals cotton genome stability across global lineages . Come harvest … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … to the multinational consortium of researchers that sequenced and assembled the simplest cotton genome ( G. …

A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …

On July 6, scientists from Lawrence Berkeley National … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is …

… research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, …

Using a novel computational approach, researchers confirm microbial diversity is … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists … artificial intelligence to decode the language of protein sequences and obtain hints of their possible functions. Yet …

Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …