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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … UDWARY: I think that was one of the JGI’s early moves into sequencing things for the purpose of looking at the …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s resources are … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … watering conditions, and then collected root, leaf and rhizosphere (soil surrounding the root) samples from the …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast
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Exploiting members of the BAHD acyltransferase family to synthesize multiple hydroxycinnamate and benzoate conjugates in yeast
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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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An integrated in vivo/in vitro framework to enhance cell-free biosynthesis with metabolically rewired yeast extracts
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Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and …
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Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.
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Metabotyping as a Stopover in Genome-to-Phenome Mapping
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