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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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An integrated in vivo/in vitro framework to enhance cell-free biosynthesis with metabolically rewired yeast extracts
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Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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Dealing with Drought: Uncovering Sorghum’s Secrets
… in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s resources are … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … watering conditions, and then collected root, leaf and rhizosphere (soil surrounding the root) samples from the …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that technology. …
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Metabotyping as a Stopover in Genome-to-Phenome Mapping
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Unique genomic traits for cold adaptation in Naganishia vishniacii, a polyextremophile yeast isolated from Antarctica
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Draft genome sequences of strains CBS6241 and CBS6242 of the basidiomycetous yeast Filobasidium floriforme
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