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Webinar: SIP technologies at EMSL and JGI
… 8. Q:  Related to Jim Moran’s talk, how long do plants need to be placed in a 13 CO2 chamber for sufficient labeling? A:  If you’re looking for … dependent. If you have a plant that’s in a very active growth phase, it would take potentially less time than a … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Frequently Asked Questions: Project Management
… https://signon.jgi.doe.gov . This account can then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information except email address. To update …
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Large-scale replicated field study of maize rhizosphere identifies heritable microbes
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … M. truncatula seedlings grown in a controlled environment chamber, so the fungus could colonize the plants’ roots. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … 80% of sugar production worldwide, but has one of the most complex genetic blueprints. Assembling a genome has been …
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JGI@25: Studying Sorghum’s Survival Skills
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … little water, full sunlight and hot temperatures, sorghum plants can photosynthesize and thrive — some varieties grow … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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JGI Portals
… enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… article in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress … Terpenes are made via a tangled network of enzymes in plants. To better pinpoint the biosynthetic routes that … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Bacterial barcoding facilitates plant microbiome studies.
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A Plant Root Atlas for Tracking Developmental Trajectories
… by neighboring cells in these processes.   One of the study’s co-authors is  Benjamin Cole , a research scientist … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, … probably, to really be able to access some of the more complex secondary metabolism systems. I’ll also say that we …
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