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Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
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User Support Analysis Group
… transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows … development of automated analysis pipelines for standard sequencing products performed at scale. Our group also …
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. … like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Novel Viral DNA Polymerases From Metagenomes Suggest Genomic Sources of Strand-Displacing Biochemical Phenotypes
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Isolation and sequencing of a single copy of an introgressed chromosome from a complex genome for gene and SNP identification
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Genome Insider
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … existing data set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The …
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Natural Prodcast Episode 15: Katherine Duncan
… before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Metabolomics Program
… mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — … state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics … with genomics, transcriptomics, imaging, and other data from EcoFAB systems can provide novel insights into the …
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