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The Power of One, Amplified
… varied with respect to the amount of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact Though … to isolate sequencing, i.e. when the targeted cells cannot be cultivated in the lab. What makes this particular …
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FICUS-NERSC/KBASE
Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather proposals are submitted … Reviewers consider technical feasibility and readiness to begin work, checking such factors as genome size, … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … orthologous genomic regions (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Protein Families (NMPF) Catalog . Published in the October issue of Nature, the study highlights the vast …
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Plant Program
A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable … data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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A Plant Root Atlas for Tracking Developmental Trajectories
Schiebinger at the University of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt … in diverse plant species beyond models,” he said. Cole annotated cell types in the plant root atlas, and noted that … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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How Filamentous Fungi Sense Food
A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and … full toolbox including Phillips and specialty screwdrivers, not to mention Allen wrenches. The fungi are similarly armed … information triggers pathways to determine which enzymes should be deployed in what order to most efficiently degrade …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … her internship. “That level of commitment and collaboration between intern and mentor is what we strive for,” Visel … learning tools. “This was very exciting to see how Rhondene not only embraced the research question and applied it to …
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JGI on the 2021 Highly Cited Researchers List
… at the JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Simon Roux Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were …
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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SPRUCE-ing Up Science
… in collaboration with researchers from ORNL, Lawrence Berkeley National Laboratory, the HudsonAlpha Institute for … up question and answer session. “A great presentation not only helps students effectively communicate their … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch … proposals with JGI and Biosciences Area researchers should contact David Gilbert (degilbe[email protected]).   …
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