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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome … This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome … hosted. The first one is the JGI plant portal called  Phytozome . There, you can query a single gene and look at …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … disease resistance  due to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how …
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Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … the special, natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day … relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … local marine environment. I went out and picked up marine plants, I picked up animals. And I asked the simple …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … And perhaps using biocatalysts we can do it in a cleaner, greener way. That’s one of our motivations, as well. Alison: …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … sojae, which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … technology (IT) activities and strategic plan. … The Plant Program Advisory Committee is chartered to offer …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … encoded on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris … research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National …
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