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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Natural Prodcast Episode 5: Brad Moore
… which is kind of the hallmark or the philosophy of his group and I think in hearing him talk about natural products … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … submitted to the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, …
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Programs & Platform Leads
… role in providing genome science capabilities to support BER's mission of achieving a predictive understanding … of complex biological, earth, and environmental systems for energy and infrastructure security. In complement to … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental … We have two key priorities:  The JGI is involved in efforts to integrate data in support of new research questions … in support of new analysis techniques.  Notice Data Portal files will be inaccessible July 22–July 24 for …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria
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Special Initiatives & Programs
… provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of … Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a scientific question …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal … Letters of Intent are not required. Applicants may submit up to two proposals per year (but may be listed as co-PI on …
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JGI Advisory Committee
… on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the Informatics Advisory Committee, the Plant Program User …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields … graduate student Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer … outside of the area of focus of most of the rest of the group, which made it feel like I had something tangible to …
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User Advisory Committees
… to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving …
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