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… I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of …

… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … products field as it relates to structure elucidation and genome mining, and how we might start to better connect …

… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … and their roles in the environment, can unlock new avenues for bio-based products and bioenergy crop enhancement. The … resources by exploring the genetic pathways responsible for their synthesis. The Secondary Metabolites Program …

… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …

… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed request falls …

… program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … reference genomes made available in the public web portal,  MycoCosm . These data improve the quantity and quality of …

… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the …

… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic …

… plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of … will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … of its user community to NCBI as well as to the  data portals that the JGI manages, immediately after data … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes …