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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
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Multiple whole-genome alignments without a reference organism
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Webinar: MycoCosm Tutorial
… of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you … data and metadata dumps available to download? A: We have multiple ways for programmatic access to MycoCosm. Please … While are still working on finalizing the tree and related publication the tree is still in development and not …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … protocol,  detailed in the journal  Microbiome , combines multiple techniques and was demonstrated using a specific … cytometry when using standard FISH probes, so the signal amplification provided by HCR-FISH is critical for …
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Metagenomic analysis of a stable trichloroethene-degrading microbial community
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IMG/M: a data management and analysis system for metagenomes
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … which imperils soybean harvests. The subsequent comparative analysis of these two pathogens, led by the JGI and Virginia … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …
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Analyze Data
… The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  … Chief Informatics Officer …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program …
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IMG/M 4 version of the integrated metagenome comparative analysis system
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Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi
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