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Community standards and future opportunities for synthetic communities in plant–microbiota research
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … a Diverse Research Topic After a video conference interview between the class and the JGI, the students found out … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … including the algae-associated microbiomes that influence algal diversity and gene expression. Sailing from …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … (both during and after his time at the JGI) as a helpful influence for both developing the method and publishing the …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … are by Jahzzar. Please help spread the word by leaving a review of Natural Prodcast on Apple podcasts, Google, Spotify, …
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Plant myo-inositol transport influences bacterial colonization phenotypes
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction methods for … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi
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Influences of Climate on Phyllosphere Endophytic Bacterial Communities of Wild Poplar
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Genome resources for three modern cotton lines guide future breeding efforts
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … community resource for comparative analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …
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Soil pH influences the structure of virus communities at local and global scales
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