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Metabolomics
JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … molecular profiles are generated for metabolites extracted from a variety of experimental samples, including organisms … more about our submission guidelines, what you can expect from your results as well as our library standards. … …
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A tale of two codes
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Uncovering Novel Genomes from Earth’s Microbiomes
… repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … 2020 in  Nature Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a … – that’s pretty remarkable.” Adding Value Beyond Genome Sequences Much of the data had been generated from …
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A Grass Model to Help Improve Giant Miscanthus
… genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … many desirable features of biofuel grasses can be studied from simpler (and smaller) models, Miscanthus has a large … Foskett Brown family. … Miscanthus sinensis genome … CABBI Sequences Miscanthus Genome … Datasets … From our partners …
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Viral Genomics Group
… abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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JGIota: Looking Back at Sequencing for Soybeans
… been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …
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David Goodstein
… as the JGI’s eukaryote research efforts expanded to include basal metazoans and plants. Working with a talented team of … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine (www.intermine.org) … Education … Selected Publications … Awards and Service …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … genes found across each of the fungal species were protein-coding hotspots. “Ensuring that the most expressed genes are … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to …
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Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga
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Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2
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Natural Prodcast Episode 18: A CSP Primer
… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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