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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … internal analytical standards to accurately measure environmental microbiome activity levels.This functional assay …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … address challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal … capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, … who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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User Support
… the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional information, including a Login Walkthrough and FAQ . –– … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Insights into the phylogeny and coding potential of microbial dark matter
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Lessons from Two Design–Build–Test–Learn Cycles of Dodecanol Production in Escherichia coli Aided by Machine Learning
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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
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Community Science Program
… projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance … is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic information into biological function. The  New Investigator and …
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Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular … An assay used for profiling transcription factor binding sites across entire genomes. This … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …
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