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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to …
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High‐resolution phenotyping of sorghum genotypic and phenotypic responses to low nitrogen and synthetic microbial communities
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Programs & Platform Leads
… genome science capabilities to support BER's mission of achieving a predictive understanding of complex biological, earth, and environmental systems for … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … JGI has deployed CRAGE to successfully domesticate some 60 strains, inserting into them a genetic sequence that acts as …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … process called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of with …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … reaction technology that enables researchers to generating thousands to millions of copies of a particular DNA sequence …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of …
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