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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Natural Prodcast Episode 7: Ben Shen
… well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … to have an index. You have to have the computer-searching systems. So one of the enabling technologies we wanted to do …
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Natural Prodcast Episode 17: Cassandra Quave
… I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … including awards funded through  BER Funding Opportunity Announcements ,  Science Focus Areas  (SFA) opportunities, … , which are both eligible for BERSS). Available Resources All JGI products are available through BERSS. …
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Nikos Kyrpides
… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … of the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his … University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, Greece …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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The JGI Leadership Team
… This group is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide the … initatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Leadership
… This group is responsible for institutional strategic planning, talent management, and convening of advisory committees to guide the … initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
Learn more
Building Sphagnum Genomic Resources
… a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … For the sphagnome project, germplasm establishment and maintenance is supported by the US DOE, Office of …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … as the rhizosphere), researchers hope this massive and integrated data set will help identify how different … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … and one of his email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, …
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