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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … All proposals will be externally peer-reviewed for …
Learn more
CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, … management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs' …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research … samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the …
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head … BA in Biology, Aristotle University of Thessaloniki, Greece …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you … similar or analogous to what’s going on in terrestrial systems with plants making toxins and so on and so forth. … pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI … of complex biological, earth, and environmental systems for energy and infrastructure security. In … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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The IMG/M data management and analysis system v.7: content updates and new features.
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a scientific question …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and … and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, … Plant microbiomes hold the amazing ability to influence plant … fitness and health. This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident …
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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
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