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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … also the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, … physiologically and enzymatically, with descriptions of how their activities influence biochemical reactions. For … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Disclaimer
… With respect to documents available from this server, neither the United … by trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States … royalty-free license to publish or reproduce these documents, or allow others to do so, for U.S. Government …
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Do Genetic Drift and Gene Flow Affect the Geographic Distribution of Female Plants in Gynodioecious Lobelia siphilitica?
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Large‐scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition
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A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey
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Marine Microbe Contains Multitudes
… abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 exist in so many varied environments? Now, a … Summary To study the lifestyles of SAR324, lead author Dominique Boeuf and colleagues set sail on research cruises … sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All …
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Game On: High School Students Drive Everglades Metagenomics Study
… Wildlife Preserve. They chose this location because much is unknown about the diversity of organisms (taxonomy) … they noticed while collecting the samples on canoes just how much change had occurred in this region since the images … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … we also hoped to use this unique opportunity to quantify how transitions to higher ploidy could be generating these … novel combinations of genetic diversity. We also found that much of the variation in physical characteristics that is …
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Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from … this hurdle, a team led by Bernhard Fuchs and his postdoctoral researcher Anissa Grieb at the MPI for Marine … binding site, resulting in target cells that give off a much brighter signal. Cells from many natural environments …
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