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Toward a Data Infrastructure for the Plant Cell Atlas.
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Laminarin stimulates single cell rates of sulfate reduction whereas oxygen inhibits transcriptomic activity in coastal marine sediment
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. … from The Ohio State University and the University of Michigan studying how virus infections cause significant … the answer is no. They refer to the infected microbial cells as virocells, a change in name first described in 2011 …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control …
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Cell by cell: population genetics in the wild
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scMicrobe PTA: near complete genomes from single bacterial cells
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Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
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Strain Engineering
The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … of new informatics tools specifically optimized for high-performance computing environments. … KBase is a … seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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The Plant Cell Wall–Decomposing Machinery Underlies the Functional Diversity of Forest Fungi
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