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Natural Prodcast
… Natural Prodcast is a “fireside chat”-style podcast about natural products and the science … line of communication to the scientific community. Host Dan Udwary talks to luminaries in the field about …
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Complete genome sequence of Thermocrinis albus type strain (HI 11/12T)
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … of hard-to-culture microbes, but the efficacy of this approach would be greatly increased by having the … The work conducted by the U.S. Department of Energy Joint Genome …
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Natural Prodcast Episode 4: Nancy Keller
… Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of … metabolism.  DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going … everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – to get …
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Learning to Look
… Machine learning approach significantly expands inovirus … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 … inoviruses are in every major microbial habitat—including soil, water, and humans—around the world. By the numbers, …
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Natural Prodcast Episode 1: The Primer, Part 1
… Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of … – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, … solve those problems. It’s a fantastic place to work, and this is the best job I’ve ever had. So, ok, that’s fine and …
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Who We Are
… (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 … of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric genomic science user facility located at Lawrence …
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Natural Prodcast Episode 19: Bill Fenical
… to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of … the very beginning of the field. I learned a lot so much history from this conversation about why the ocean was … are many others, including Streptomycetes, which are common soil bacteria. DAN UDWARY: Yeah, we talk about them a lot …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying … in an environment that influence system behavior.  Through this identification, metabolomics enables functional genome … they grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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