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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s mentor during her 2018 …
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Sequencing Technologies & Products
… Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies and … An assay used for profiling transcription factor binding sites across entire genomes. This technology has …
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Uncovering the Core Microbiome and Distribution of Palmerolide in Synoicum adareanum Across the Anvers Island Archipelago, Antarctica
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … the development of the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his …
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Frequently Asked Questions: Project Management
… You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … proposal calls and proposal submission, as well as examples of approved proposals, please visit the Proposals FAQ .  …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … products and bioenergy crop enhancement. The program aims to tap into the largely unexplored biochemical diversity …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … viruses. Now categorized in their own phylum,  Nucleocytoviricota , these giant viruses boast larger genomes than …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental … Reviewers consider technical feasibility and readiness to begin work, checking such factors as genome size, …
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … had been reaching out to many researchers with the hope of getting support for a research project for his class of 18 … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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