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… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic information into biological function. The  New Investigator …

… JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … out these distractions. Combining genome and transcriptome information allowed the team to have a much more … split between fungal and bacterial enzymes. Yet, they found proteomic data told a different story: fungal enzymes …

… NOTICE Information from this server resides on a computer system … the United States Government nor the University of California nor any of their employees, makes any warranty, … for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or …

… group is focus on developing methods for converting digital information from sequence databases into biotechnological or … in:  characterizing novel enzymatic activities using phylogenomic driven approaches, and understanding the design principles for successfully engineering pathways to function in heterologous hosts, by …

… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … machine learning identified specific genes associated with metabolic flexibility, distinguishing generalist species …

… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall … these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes …

… the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. … population dynamics in co-culture. These experiments aim to inform the engineering of stable, synthetic microbial … as part of the Community Science Program (CSP)  Functional Genomics proposal call. …

… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … of the key community participants and enabling future metagenomics studies.   …