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JGI@25: Using Team Science to Build Communities Around Data
… countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Disclaimer
… system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by … … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Natural Prodcast Episode 9: Roger Linington
… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … institutions in developing nations to do natural products based drug discovery, predominantly in diseases of … from drug discovery in every possible disease target area, using an enormous array of different isolation strategies …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … you use that to do? Brad: Yeah, absolutely. You know, we’re using it as a way to be able to better predict when a toxic … to really challenge me, and as being sort of a laboratory based scientist, to get out onto the ocean and do ocean …
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Natural Prodcast Episode 22: Alison Narayan
… work as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … about making them. So I really came at it not necessarily based on the biology really just from as a simple organic …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … to your extract and try to purify the molecule that’s causing that test to be successful. Right? Because we don’t – … to the market. And we get to say that six of those are based on natural product structures.  DAN: One of the things …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient …
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Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Examples: Successful LOIs & Submissions
PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … … soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …
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Sequencing Submission Requirements for DNA Synthesis
… written by M. Wayne Davis or commercial options include SnapGene . … How To Use ApE To save your ApE file as a Genbank …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … plant species. It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint … descriptions from nearest phylogenetic neighbors. Our pipeline allowed us to add expression-derived additional …
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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