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Litter chemistry influences decomposition through activity of specific microbial functional guilds
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Uncovering novel functions of the enigmatic, abundant, and active Anaerolineae in a salt marsh ecosystem.
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Mass spectrometry imaging–based assays for aminotransferase activity reveal a broad substrate spectrum for a previously uncharacterized enzyme
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … configuration of electrons that becomes really reactive. And so, different types of enediyne molecules can … why the stereochemistry was that way. And he told me, it’s enzymes. It’s magic.  BEN:  Yeah, right.  DAN: I thought …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … things, like, are we waking them up? Are they metabolically active and slowly ticking away at these extreme … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Toward More Efficient Artificial Photosynthesis
… (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of … with a microfluidics platform that mimics the metabolically active microcompartments where photosynthesis takes place. …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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NeLLi — Symposium on New Lineages of Life
… 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the … uncovering microbial novelties to deciphering metabolic and functional capabilities. Overview of Symposium Goals … User Project Coordination Rekha Seshadri,  Functional Annotation Group Natalia Ivanova, Functional Annotation Lead …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … plant species. It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint … Atlas and PPRD could help with understanding gene functional roles, but the experimental inconsistency makes …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and …
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