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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … is leading a DTRA-funded program on agnostic pathogen detection and surveillance in complex samples. … B.Sc. … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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ContScout: sensitive detection and removal of contamination from annotated genomes
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The Epigenomic Landscape of Prokaryotes
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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
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acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … environment you mentioned, you know that they can have consequences to marine life that surrounds it, whether it be …
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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of …
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