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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as … Reviewers consider technical feasibility and readiness to begin work, checking such factors as genome size, …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … we’re trying to improve the pharmacology of it. It has some issues. It has a short half life in vivo. It’s toxic, has … Natural Prodcast is proud to welcome Professor Brian Bachmann, from the Vanderbilt …
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Frequently Asked Questions: Project Management
… Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable …
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Metabolomics
… JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI … and environmental samples using advanced liquid chromatography mass spectrometry (LC-MS) based methods in …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … looks like fun. Actually, I quite enjoyed that. So pretty special way to be able to hang out with a parent who then …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … context to get people thinking and tackling some of the issues. It was really productive,” he said.  Data reporting …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … where chemical synthesis is actually-- might be better, especially in really low-yielding products. We're interested … to make. DAN: Really? BETSY PARKINSON: Well, so one of the issues is in order to make the tetrapeptide, that's a 12 …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … myself a bit of that, too. Although we all have our specializations and the things that we dig into maybe a bit … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts …
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code throughout … any aspect of this event/conference — including talks, workshops, parties, social media or other online media. …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …
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Natural Prodcast Episode 18: A CSP Primer
… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … to do science. Since I started working for JGI, and especially since I started the podcast, I get lots of … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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