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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from … to help bolster the bioeconomy. Summary A team led by Michelle O’Malley, a chemical engineer at the University …
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Getting to the core of the gut microbiome
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Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach
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Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … group at the JGI to further explore the ecological and evolutionary drivers of virus-host dynamics in soil …
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Stop codon reassignments in the wild
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 … genes reliably reflect the broader evolutionary relationships among fungal species. The team also found …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science … microbial populations in other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine … strides in generating genome sequences for members of the microbial world through bulk community sequencing …
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Cell by cell: population genetics in the wild
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Microbial Ecology and Site Characteristics Underlie Differences in Salinity‐Methane Relationships in Coastal Wetlands
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