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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … their associated metadata, around the world. … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes from three domains of …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … rot fungi in the genus Lentinula. Dan Rokhsar looked to the evolutionary history of strawberries as part of a study to …
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Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past
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Bacillus anthracis genome organization in light of whole transcriptome sequencing
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Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi.
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … near this tree and so there was probably some historical evolutionary event where the DNA transferred from the fungus … things use to adapt. So secondary metabolism is, itself, evolution. ALISON: Hmm, yeah, I guess this relates to when I …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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John Vogel
… these resources to understand genome organization and regulation, abiotic stress tolerance, and the mechanisms by … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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RNA-Seq Reveals that Light and Darkness Are Different Stimuli in Freshwater Heterotrophic Actinobacteria
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Impact of Harvest on Switchgrass Leaf Microbial Communities
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