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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Metagenome-Assembled Genomes for “Candidatus Phormidium sp. Strain AB48” and Co-occurring Microorganisms from an Industrial Photobioreactor Environment
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact …
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JGI Workshop at SIMB NP Meeting
… and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and … genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the …
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … by the Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, based in … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore play a critical role in the global … scientists have shown at least two microorganisms from different phyla are capable of methanogenesis. Using …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the … under FP00005685. In addition, M.D. acknowledges funding from a National Defense Science and Engineering Graduate …
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THE Bioenergy Tree
Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them tantalizing plants to harness for bioenergy. In this episode, hear from Oak Ridge National Laboratory scientists who have …
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