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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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River microbiomes from around the world: Kelly Wrighton
… University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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A roadmap for equitable reuse of public microbiome data
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced …
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Partners
… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an introduction to …
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