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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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Viral niche-partitioning: Comparative genomics of giant viruses across environmental gradients in a High Arctic freshwater-saltwater lake
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Nikos Kyrpides
… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Scientific Advisory Committee
JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … on the effective management and strategic objectives of the JGI. The SAC serves as the Institute's key external … and, with concurrence from the DOE Office of Biological and Environmental Research (BER) program, set the final sequence …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … rich metabolite profiles from diverse biological and environmental samples using advanced liquid chromatography …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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University of California, Merced Internship Program
… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … from sequence databases into biotechnological or environmental applications.  We are interested in:  …
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