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Programs & Platform Leads
… genome science capabilities to support BER's mission of achieving a predictive understanding of complex biological, earth, and environmental systems for energy and infrastructure …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Comparative genomics reveals insights into characterization and distribution of quorum sensing-related genes in Shewanella algae from marine environment and clinical sources
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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Bright luminescence of Vibrio fischeri aconitase mutants reveals a connection between citrate and the Gac/Csr regulatory system
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … the distributed and dynamic metabolite networks of environmental microbes and how they transform their …
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Viral niche-partitioning: Comparative genomics of giant viruses across environmental gradients in a High Arctic freshwater-saltwater lake
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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