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Floodplain nitrifiers harbor the genetic potential for utilizing a wide range of organic nitrogen compounds
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Modular cell-free expression plasmids to accelerate biological design in cells
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JGI@25: Using Team Science to Build Communities Around Data
… the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of … 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships to evolution of genomic mechanisms — … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these … the tools and data available through MycoCosm — a platform widely used across the research community — the work lowers technical barriers for …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice … user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, and promotes communication and collaboration …
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Deeplasmid: deep learning accurately separates plasmids from bacterial chromosomes
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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CSP Functional Genomics
… and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn about the general review process or find details on the internal …
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Sequencing Technologies & Products
… Probing (SIP) Metagenomics to the broader scientific community. The pipeline utilizes internal analytical …
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Data Ecosystem
… access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level … The NMDC seeks to connect and engage the microbiome community to unlock new possibilities in microbiome data …
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