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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa
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A Bioinformatician's Guide to Metagenomics
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Sequencing the fungal tree of life
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … category Research Scientist Natalia Ivanova, Biology & Biochemistry category Prokaryote Super Program head Nikos …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of …
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Phylogenomic analysis of polyketide synthase-encoding genes in Trichoderma
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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