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Secondary Metabolites Program
… underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …
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Metagenomic reconstructions of bacterial CRISPR loci constrain population histories
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Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly
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Partners
Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National …
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Disclaimer
… from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect to documents … … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) … Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic …
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Identifying candidate structured RNAs in CRISPR operons.
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Natural Prodcast Episode 9: Roger Linington
Biodiversity Groups, and it’s this great program funded by the National Institutes of Health and the National Science Foundation to create international partnerships in developing countries … products field as it relates to structure elucidation and genome mining, and how we might start to better connect …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … within the user community. … The SAC is a board convened by the JGI Director to provide a scientific and technical … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of Insects
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acCRISPR: an activity-correction method for improving the accuracy of CRISPR screens
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Rapid cell-free characterization of multi-subunit CRISPR effectors and transposons
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