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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … was from agricultural research. Several species of Olpidium are obligate endoparasites of some common crops, such as … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Co‑cultivation of anaerobic fungi with Clostridium acetobutylicum bolsters butyrate and butanol production from cellulose and lignocellulose.
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Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting … with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants … water and nutrients. In order to do so, these organisms share space at cellular scale: fungi stretch a network of …
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Environmental Genomics Group
… on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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How Filamentous Fungi Sense Food
… Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall … of sustainable biofuels and bioproducts. Filamentous fungi are also being used in the biotechnology industry to produce …
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Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … While an ever-increasing number of phage and virus genomes have …
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Lignin deconstruction by anaerobic fungi
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Multi-chassis engineering for heterologous production of microbial natural products
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Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi
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