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… The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once … researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … snowflake on a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … the virus-host boundary clearly defined using functional annotation methods, it was possible to distinguish between …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of … properties encoded within those genomes. Our aim is to more fully capture microbial and viral diversity, leading …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … group operates as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly … the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …

… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint meeting! “Empowering Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in … science. They provide the scientific community access to cutting-edge capabilities for omics-based and …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … Or genes that you can put a name into it, some sort of annotation, but they are not really well characterized. But, …

… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … of my collaborators Spencer Nyholm has been working on the accessory nidamental gland or ANMG. And the ANMG is a second … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …

… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … diversity. Examining databases like MycoCosm , the JGI’s online fungal genomics resource platform, reveals a stark …

… and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the … : The best part of being a JGI intern has been just the accessibility to an abundance of knowledge. There’s so many …

… their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC … program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and …

… Protein annotations provide insights into environmental tendencies … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the … Metagenome Stability Diagram in IMG/M Data portal … Tool …