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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … in a single experiment. “Effectively, you can identify conserved binding patterns shared between genomes of … where transcription factors have been repurposed during evolution to control new functions,” O’Malley said. …
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Deeply conserved synteny resolves early events in vertebrate evolution
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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Functional autonomy of distant-acting human enhancers
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Beyond the census of human gut dwellers
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base … DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Two major chromosome evolution events with unrivaled conserved gene content in pomegranate
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of …
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Virus-associated organosulfur metabolism in human and environmental systems
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