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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI … of complex biological, earth, and environmental systems for energy and infrastructure security. In complement to … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … this and deal with it is through these antibiotic- or antifungal-producing bacteria that live on the exoskeleton of …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary … algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … The Secondary Metabolites Program targets the vast and underexplored …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … the fungus garden. It gardens the fungus in order to make parts of it for food.  And then some of our more recent …
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JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI Director to … on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … fungi developed symbiotic relationships, and how the mutualistic associations allow host plants, such as candidate  …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … understand our broader community of users. Each portal lists a contact, or you can reach out via the form on our …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS … program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological … MycoEd receives organizational and developmental support from KBase (The …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   … to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA … needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI …
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