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Calculating the Costs of Multiple Switchgrass Gene Copies
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated … about how C4 perennial grasses like switchgrass respond to pronounced climate shifts. (C4 plants use a more …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … late great Warp Drive Bio, a biotech startup where we did genome mining together. Marc was the Head of Experimental … by different types of secondary metabolites? How does it respond to invasion? How are you resilient? And how does that …
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Yasuo Yoshikuni
… includes engineering of non-model yeasts for production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating … the first microbial platform technologies unlocking the potential of macroalgae as an environmentally sustainable …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … microbial genes. These genes were identified based on their potential to efficiently degrade lignocellulose in cow … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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Publication Policy
… assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … provide Users with a list of contributors and their corresponding ORCiD and relevant CRediT taxonomy categories. …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … whose biomass can be renewably converted into energy or biofuels. Although a member of the grass family, as its name … the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will help …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … in industrial materials, pharmaceutical products, and as biofuel precursors. Collectively, hundreds of terpene … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and …
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An Integrated Dataset to Understand Ecosystem Interaction
… how different elements of the ecosystem interact and respond to changes in the environment. The Impact Dubbed “the” … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Genomic Potential of Marinobacter aquaeolei, a Biogeochemical “Opportunitroph”
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … are sources of natural products, and have potential as biofuel feedstocks. Understanding the genetic underpinnings … an organism may tune gene expression; and investigate corresponding proteins. PhycoCosm’s built-in connection to the DOE …
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Natural Prodcast Episode 17: Cassandra Quave
… it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … question. I don’t know how amenable plants are really to a genome-based approach for screening. I think a lot of our … but at the same time, there’s a lot of interesting starting points for medicinal chemists to play with. And we tried to …
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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