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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … … For further details, please reach out to the Group Lead …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … plant roots, as with Arabidopsis thaliana. Using a coupled experimental and computational approach, we employ …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, …
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University of California, Merced Internship Program
… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … Representative. Please check with your unit director or supervisor for the appropriate contact name, email address … will be required to execute a 2024 version .  The recent updates were approved by the DOE to address the DNA …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … recommendations on how the JGI Science Programs can best support the user community. Advise the JGI on other topics as …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and … the data availability section, include those DOIs in the supplemental materials for your publication. … Proposal DOIs …
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Partners
… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In … was tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes …
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program … Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 …
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