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Bacteria and Fungi Divvy Up the Work in Forest Floor
… nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to … Pinpointing the processes happening on and in forest soil also better enriches models of global carbon and … able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  … crack this case, then that would open up our field to other study. And so it was kind of an early example, to try to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … an environment. For example, SIP experiments can show how soil microbes cycle nitrogen and carbon, or how freshwater … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle
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Microbes in thawing permafrost: the unknown variable in the climate change equation
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … feedstock for biofuels thanks to its drought and flood hardiness. Even with little water, full sunlight and hot …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the … engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has supported over … , 2023 Wu et al. Structural characterization of a soil viral auxiliary metabolic gene product - a functional …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … and evolutionary drivers of virus-host dynamics in soil microbial communities. … B.S. in Microbiology, …
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Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost
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